[ABCD](abcdefghij)
- Classes: Low resolution protein structures
- Folds: Ribosome and ribosomal fragments
- Superfamilies: Ribosome and ribosomal fragments
- Families: Ribosome complexes
- Protein Domains: 70S ribosome functional complex
- Species: Thermus thermophilus [TaxId: 274]
PDB Entries
| PDB ID | OPM | Mutant | Chain Formula | Resolution | HETNAM | ||
|---|---|---|---|---|---|---|---|
| Amino Acid sequence | SCOPe Family Level | CATH Homology Level | |||||
| 1ibk | [ABCDEFGHIJKLMNOPQRS][a](ab) | [A19][a](ab) | [A19][a](ab) | 3.31 | MG:MAGNESIUM ION PAR:PAROMOMYCIN ZN:ZINC ION | ||
| 1ibl | [ABCDEFGHIJKLMNOPQRS][a](abcd) | [A19][a](abcd) | [A19][a](abcd) | 3.11 | MG:MAGNESIUM ION PAR:PAROMOMYCIN ZN:ZINC ION | ||
| 1ibm | [ABCDEFGHIJKLMNOPQRS][a](abcd) | [A19][a](abcd) | [A19][a](abcd) | 3.31 | MG:MAGNESIUM ION ZN:ZINC ION | ||
| 1jgo | [ABCDEFGHIJKLMNOPQRS][a](a2bcd) | [A19][a](a2bcd) | [A19][a](a2bcd) | 5.6 | 1MA:6-HYDRO-1-METHYLADENOSINE-5___sq___-MONOPHOSPHATE 2MG:2N-METHYLGUANOSINE-5___sq___-MONOPHOSPHATE 4SU:4-THIOURIDINE-5___sq___-MONOPHOSPHATE 5MC:5-METHYLCYTIDINE-5___sq___-MONOPHOSPHATE 5MU:5-METHYLURIDINE 5___sq___-MONOPHOSPHATE 7MG:7N-METHYL-8-HYDROGUANOSINE-5___sq___-MONOPHOSPHATE H2U:5,6-DIHYDROURIDINE-5___sq___-MONOPHOSPHATE M2G:N2-DIMETHYLGUANOSINE-5___sq___-MONOPHOSPHATE OMC:O2___sq___-METHYLYCYTIDINE-5___sq___-MONOPHOSPHATE OMG:O2___sq___-METHYLGUANOSINE-5___sq___-MONOPHOSPHATE PSU:PSEUDOURIDINE-5___sq___-MONOPHOSPHATE YG:WYBUTOSINE | ||
| 1jgp | [ABCDEFGHIJKLMNOPQRS][a](a2bcd) | [A19][a](a2bcd) | [A19][a](a2bcd) | 7 | 1MA:6-HYDRO-1-METHYLADENOSINE-5___sq___-MONOPHOSPHATE 2MG:2N-METHYLGUANOSINE-5___sq___-MONOPHOSPHATE 4SU:4-THIOURIDINE-5___sq___-MONOPHOSPHATE 5MC:5-METHYLCYTIDINE-5___sq___-MONOPHOSPHATE 5MU:5-METHYLURIDINE 5___sq___-MONOPHOSPHATE 7MG:7N-METHYL-8-HYDROGUANOSINE-5___sq___-MONOPHOSPHATE H2U:5,6-DIHYDROURIDINE-5___sq___-MONOPHOSPHATE M2G:N2-DIMETHYLGUANOSINE-5___sq___-MONOPHOSPHATE OMC:O2___sq___-METHYLYCYTIDINE-5___sq___-MONOPHOSPHATE OMG:O2___sq___-METHYLGUANOSINE-5___sq___-MONOPHOSPHATE PSU:PSEUDOURIDINE-5___sq___-MONOPHOSPHATE YG:WYBUTOSINE | ||
| 1jgq | [ABCDEFGHIJKLMNOPQRS][a](a2bcd) | [A19][a](a2bcd) | [A19][a](a2bcd) | 5 | 1MA:6-HYDRO-1-METHYLADENOSINE-5___sq___-MONOPHOSPHATE 2MG:2N-METHYLGUANOSINE-5___sq___-MONOPHOSPHATE 4SU:4-THIOURIDINE-5___sq___-MONOPHOSPHATE 5MC:5-METHYLCYTIDINE-5___sq___-MONOPHOSPHATE 5MU:5-METHYLURIDINE 5___sq___-MONOPHOSPHATE 7MG:7N-METHYL-8-HYDROGUANOSINE-5___sq___-MONOPHOSPHATE H2U:5,6-DIHYDROURIDINE-5___sq___-MONOPHOSPHATE M2G:N2-DIMETHYLGUANOSINE-5___sq___-MONOPHOSPHATE OMC:O2___sq___-METHYLYCYTIDINE-5___sq___-MONOPHOSPHATE OMG:O2___sq___-METHYLGUANOSINE-5___sq___-MONOPHOSPHATE PSU:PSEUDOURIDINE-5___sq___-MONOPHOSPHATE YG:WYBUTOSINE | ||
| 1mvr | [AB](abcdef) | [A2](abcdef) | [A2](abcdef) | ELECTRON MICROSCOPY 12.8 |
|||
| 2om7 | [ABCD](abcdefghij) | [ABCD](abcdefghij) | [ABCD](abcdefghij) | ELECTRON MICROSCOPY 7.3 |
4SU:4-THIOURIDINE-5___sq___-MONOPHOSPHATE 5MC:5-METHYLCYTIDINE-5___sq___-MONOPHOSPHATE 5MU:5-METHYLURIDINE 5___sq___-MONOPHOSPHATE H2U:5,6-DIHYDROURIDINE-5___sq___-MONOPHOSPHATE PSU:PSEUDOURIDINE-5___sq___-MONOPHOSPHATE | ||
| 2r1g | [ABC](abcdefg) | [ABC](abcdefg) | [ABC](abcdefg) | ELECTRON MICROSCOPY 12.5 |
|||
| 2uxb | [ABCDEFGHIJKLMNOPQRS][a](abc) | [A4BCDEFGHIJKLMNOP][a](abc) | [A5BCDEFGHIJKLMNO][a](abc) | 3.1 | K:POTASSIUM ION MG:MAGNESIUM ION PAR:PAROMOMYCIN ZN:ZINC ION | ||
| 2uxd | [ABCDEFGHIJKLMNOPQRS][a](abc) | [A4BCDEFGHIJKLMNOP][a](abc) | [A5BCDEFGHIJKLMNO][a](abc) | 3.2 | K:POTASSIUM ION MG:MAGNESIUM ION PAR:PAROMOMYCIN ZN:ZINC ION | ||
| 2vqe | [ABCDEFGHIJKLMNOPQRS][a](abc) | [A4BCDEFGHIJKLMNOP][a](abc) | [A5BCDEFGHIJKLMNO][a](abc) | 2.5 | K:POTASSIUM ION MG:MAGNESIUM ION PAR:PAROMOMYCIN TM2:5-{[(2-SULFOETHYL)AMINO]METHYL}URIDINE 5___sq___-(DIHYDROGENPHOSPHATE) ZN:ZINC ION | ||
| 2vqf | [ABCDEFGHIJKLMNOPQRS][a](abc) | [A4BCDEFGHIJKLMNOP][a](abc) | [A5BCDEFGHIJKLMNO][a](abc) | 2.9 | K:POTASSIUM ION MG:MAGNESIUM ION PAR:PAROMOMYCIN TM2:5-{[(2-SULFOETHYL)AMINO]METHYL}URIDINE 5___sq___-(DIHYDROGENPHOSPHATE) ZN:ZINC ION | ||
*Chain Formula of OLIGAMI.
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA
